DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC2B and emc2

DIOPT Version :9

Sequence 1:NP_001262651.1 Gene:EMC2B / 42045 FlyBaseID:FBgn0038461 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_998709.1 Gene:emc2 / 407073 ZFINID:ZDB-GENE-040625-82 Length:297 Species:Danio rerio


Alignment Length:255 Identity:123/255 - (48%)
Similarity:187/255 - (73%) Gaps:1/255 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNERHLILEQVIIAALDTARFDIATK 72
            ::|.::||:.|.||||..|:||::|.:...::.:...|.|::..:|.|||:|||||.:|.|:|..
Zfish    10 VTWEEMRDKLRKWREENYRNSEQIVDVGEELINEHASKLGDDIWIIYEQVMIAALDCSRDDLAWS 74

  Fly    73 CTKQLALEFPGSLRVMKFKAMRYEALEQYDEADEVLDAIIAKDETNAAPRKRKIAILKARGRRLE 137
            |.::|..:||.|.||.:...||.||||:||:|:::.|:|:..|.||.|.|||||.||:|:|:..|
Zfish    75 CLQELKRQFPDSHRVKRLAGMRLEALERYDDANKLYDSILQDDPTNTAARKRKICILRAQGKSSE 139

  Fly   138 AIKELNEYLKKFMSDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAEIRYTMGG 202
            ||:||||||::|:.||||||||..:|:.|.::.|||||:||:::.|||:||..::.||::||.||
Zfish   140 AIRELNEYLEQFVGDQEAWHELSELYINEHDYAKAAFCLEELMMTNPHNHLYCEQYAEVKYTQGG 204

  Fly   203 VENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSK-RKELQKLSQWALEQL 261
            :||:|.||.|::||||||..|:|||:|:|:..:|:..|..||:| :|:..|.:.||..|:
Zfish   205 LENLELARKYFAQALKLNNRNMRALFGLYMSASHIAASPKVSAKVKKDNVKYAAWAAAQI 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC2BNP_001262651.1 TPR repeat 86..113 CDD:276809 13/26 (50%)
TPR_11 154..221 CDD:290150 37/66 (56%)
TPR repeat 154..181 CDD:276809 15/26 (58%)
TPR repeat 186..219 CDD:276809 17/32 (53%)
emc2NP_998709.1 TPR 1. /evidence=ECO:0000255 87..120 14/32 (44%)
TPR repeat 87..115 CDD:276809 13/27 (48%)
TPR_19 97..164 CDD:291240 40/66 (61%)
TPR repeat 120..150 CDD:276809 20/29 (69%)
TPR 2. /evidence=ECO:0000255 155..188 18/32 (56%)
TPR repeat 155..182 CDD:276809 16/26 (62%)
TPR_11 156..222 CDD:290150 36/65 (55%)
TPR repeat 188..221 CDD:276809 17/32 (53%)
TPR 3. /evidence=ECO:0000255 192..225 18/32 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596681
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3060
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8785
Inparanoid 1 1.050 264 1.000 Inparanoid score I3060
OMA 1 1.010 - - QHG55498
OrthoDB 1 1.010 - - D465703at33208
OrthoFinder 1 1.000 - - FOG0003504
OrthoInspector 1 1.000 - - otm26198
orthoMCL 1 0.900 - - OOG6_102350
Panther 1 1.100 - - O PTHR12760
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2876
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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