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Protein Alignment MECP2 and mbd-2
DIOPT Version :10
| Sequence 1: | NP_001104262.1 |
Gene: | MECP2 / 4204 |
HGNCID: | 6990 |
Length: | 498 |
Species: | Homo sapiens |
| Sequence 2: | NP_001021012.1 |
Gene: | mbd-2 / 3565704 |
WormBaseID: | WBGene00023409 |
Length: | 210 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 99 |
Identity: | 25/99 - (25%) |
| Similarity: | 40/99 - (40%) |
Gaps: | 15/99 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Human 208 TTRPKAATSEGVQVKRVLEKSPGKLLVKMPFQTSPGGKAEGGGATTSTQVMV----IKRPGRKRK 268
|.:|:.. ||...:|::...:.....||| |....:.:..||.: ..|.|..:|
Worm 54 TAQPETK----VQNDELLKRRSRRKTEMRPFQ------AMWAKSLSGLQVSIPHEKPDRIGDVKK 108
Human 269 AEADPQAIPKKRGRKPGSVVAAAAAEAKKKAVKE 302
||...::|.|....||| |.|....||....:::
Worm 109 AEYSYESIKKISLIKPG-VSAFTPEEAMTTVIQQ 141
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| MECP2 | NP_001104262.1 |
MBD |
104..181 |
CDD:128673 |
|
| mbd-2 | NP_001021012.1 |
MBD_C |
112..206 |
CDD:464072 |
9/31 (29%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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