DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and NKX6-2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_796374.2 Gene:NKX6-2 / 84504 HGNCID:19321 Length:277 Species:Homo sapiens


Alignment Length:281 Identity:71/281 - (25%)
Similarity:111/281 - (39%) Gaps:76/281 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 LNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTG 283
            ::.|.||              |...::|..||..:.|...:.::||         .|.|.|||  
Human     1 MDTNRPG--------------AFVLSSAPLAALHNMAEMKTSLFPY---------ALQGPAGF-- 40

  Fly   284 LEDKSCSRYTDTVMNSYQSMSVPA--SASAQFAQFYQHATA--AASAVSAASAGAIG----VDSL 340
                                ..||  ...||......|..:  ....|.||..|.:|    ::.|
Human    41 --------------------KAPALGGLGAQLPLGTPHGISDILGRPVGAAGGGLLGGLPRLNGL 85

  Fly   341 GNACTQPASGVMPGAGGAGGAG----IADLPRYP---WMTLTDWMGSPFE--RVV----CGDFNG 392
            .:     ::||..|...|...|    :|:||..|   |..:.  .|:|:.  |:.    .|....
Human    86 AS-----SAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVV--QGAPWRDPRLAGPAPAGGVLD 143

  Fly   393 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 457
            .:| .::..|.|::..|...|||.|....||....|..:|::|.:||.|:|:||||||.|.:|. 
Human   144 KDG-KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR- 206

  Fly   458 RAVKEINEQARRDREEQEKMK 478
            .||:..:.:.::| .:.||:|
Human   207 HAVEMASAKKKQD-SDAEKLK 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 23/51 (45%)
Abdominal-A 456..478 CDD:289192 5/21 (24%)
NKX6-2NP_796374.2 Repressor domain. /evidence=ECO:0000250|UniProtKB:D3Z4R4 89..142 14/54 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..155 3/23 (13%)
Homeobox 151..204 CDD:306543 23/52 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..250 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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