DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and ATHB13

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_177136.1 Gene:ATHB13 / 843314 AraportID:AT1G69780 Length:294 Species:Arabidopsis thaliana


Alignment Length:101 Identity:33/101 - (32%)
Similarity:49/101 - (48%) Gaps:16/101 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK------------LKKELRAVK 461
            |...|||.|...:.|...|::::|.||.|..|||.|||||||.:            ||::...:|
plant    93 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK
TKQLEKDYDTLKRQFDTLK 157

  Fly   462 EINE--QARRDREEQEKM--KAQETMKSAQQNKQVQ 493
            ..|:  |....:.:.|.|  |.:|..:|...||:.:
plant   158 AENDLLQTHNQKLQAEIMGLKNREQTESINLNKETE 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 21/56 (38%)
Abdominal-A 456..478 CDD:289192 5/25 (20%)
ATHB13NP_177136.1 Homeobox 85..138 CDD:395001 21/44 (48%)
HALZ 140..182 CDD:396657 8/41 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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