DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment abd-A and HB-7

DIOPT Version :9

Sequence 1:	NP_732176.1	Gene:	abd-A / 42037	FlyBaseID:	FBgn0000014	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	NP_182191.1	Gene:	HB-7 / 819280	AraportID:	AT2G46680	Length:	258	Species:	Arabidopsis thaliana

Alignment Length:	164	Identity:	35/164 - (21%)
Similarity:	71/164 - (43%)	Gaps:	34/164 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   399 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK-KELRAVKE 462
            :..::.::..|...||..|.....|..|:::::|..|.|..||:.|||||:|.:.| |:|.....
plant    30 KNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYN 94

  Fly   463 I---NEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQ-------------QQQQQQHQ 511
            |   |......:.|..|.:.|..:...|:.|:..|::.|::::|             ..:.:..:
plant    95 ILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSSTHHESENEE 159

  Fly   512 QQQQQPQD------------HHSIIAHNPGHLHH 533
            .::::|::            ||.::..     ||
plant   160 NRRRKPEEVRPEMEMKDDKGHHGVMCD-----HH 188

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	17/51 (33%)
abd-A	NP_732176.1	Abdominal-A	456..478	CDD:289192	5/24 (21%)
HB-7	NP_182191.1	Homeobox	35..85	CDD:395001	17/49 (35%)
HB-7	NP_182191.1	HALZ	87..126	CDD:396657	8/38 (21%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910