DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HB22

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_850266.1 Gene:HB22 / 818233 AraportID:AT2G36610 Length:185 Species:Arabidopsis thaliana


Alignment Length:138 Identity:34/138 - (24%)
Similarity:65/138 - (47%) Gaps:15/138 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 DWMGSPFERVVCG---DFNGPNGCPRRRGRQTYTRFQTLE--LEKEFHFN----HYLTRRRRIEI 431
            |.:..|...|..|   :.|..||..:::.:.|..:.:.||  .::|...|    ..|...|::::
plant    45 DILHVPLAMVESGYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKL 109

  Fly   432 AHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARR--DREEQEKMKAQETMKSAQQNKQVQQ 494
            :..|.|..|||.:|||||:.:.|.  :.::.:.|..|:  |...:||...||.:  .|....:::
plant   110 SKELGLQPRQIAVWFQNRKARWKN--KQLEHLYESLRQEFDIVSREKELLQEEL--IQLKSMIRE 170

  Fly   495 QQQQQQQQ 502
            ....:::|
plant   171 DSSCKKKQ 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 17/61 (28%)
Abdominal-A 456..478 CDD:403567 5/23 (22%)
HB22NP_850266.1 Homeodomain 70..133 CDD:459649 17/62 (27%)
HALZ 134..167 CDD:460477 8/34 (24%)

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