DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HB22

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_850266.1 Gene:HB22 / 818233 AraportID:AT2G36610 Length:185 Species:Arabidopsis thaliana


Alignment Length:138 Identity:34/138 - (24%)
Similarity:65/138 - (47%) Gaps:15/138 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 DWMGSPFERVVCG---DFNGPNGCPRRRGRQTYTRFQTLE--LEKEFHFN----HYLTRRRRIEI 431
            |.:..|...|..|   :.|..||..:::.:.|..:.:.||  .::|...|    ..|...|::::
plant    45 DILHVPLAMVESGYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKL 109

  Fly   432 AHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARR--DREEQEKMKAQETMKSAQQNKQVQQ 494
            :..|.|..|||.:|||||:.:.|.  :.::.:.|..|:  |...:||...||.:  .|....:::
plant   110 SKELGLQPRQIAVWFQNRKARWKN--KQLEHLYESLRQEFDIVSREKELLQEEL--IQLKSMIRE 170

  Fly   495 QQQQQQQQ 502
            ....:::|
plant   171 DSSCKKKQ 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 17/57 (30%)
Abdominal-A 456..478 CDD:289192 5/23 (22%)
HB22NP_850266.1 Homeobox 76..133 CDD:395001 17/56 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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