DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HAT9

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_179865.1 Gene:HAT9 / 816811 AraportID:AT2G22800 Length:274 Species:Arabidopsis thaliana


Alignment Length:239 Identity:61/239 - (25%)
Similarity:94/239 - (39%) Gaps:62/239 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 GVDSLGNACTQPA--SGVMPGAGGA-------GGAGIADLPRYPWMTLTDWMGSPFERVVCGDFN 391
            |.|.|   |.|.:  |||...:.|.       ||   .:.|....||         |||:.....
plant    55 GADQL---CRQTSSHSGVSSFSSGRVVKRERDGG---EESPEEEEMT---------ERVISDYHE 104

  Fly   392 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            ...|...|: :...|:.|:..||:.|..:..|..:::..:|..|.|..||:::||||||.:.|. 
plant   105 DEEGISARK-KLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKL- 167

  Fly   457 LRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDHH 521
                    :|...|.|..:  |..||:  |.:|.::|::.|:.:..:..|               
plant   168 --------KQTEVDCEFLK--KCCETL--ADENIRLQKEIQELKTLKLTQ--------------- 205

  Fly   522 SIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGIGGGLG 565
                  |.::|  :......|......:|.|.||.|.| |||.|
plant   206 ------PFYMH--MPASTLTKCPSCERIGGGGGGNGGG-GGGSG 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 17/51 (33%)
Abdominal-A 456..478 CDD:289192 3/21 (14%)
HAT9NP_179865.1 HOX 112..166 CDD:197696 18/54 (33%)
HALZ 168..211 CDD:128634 13/69 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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