DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and HB6

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_565536.1 Gene:HB6 / 816775 AraportID:AT2G22430 Length:311 Species:Arabidopsis thaliana


Alignment Length:152 Identity:33/152 - (21%)
Similarity:63/152 - (41%) Gaps:19/152 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK------------LKKELRAVK 461
            |...|||.|...:.|...|::::|..|.|..||:.:||||||.:            ||.:..:::
plant    70 QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK
TKQLEKDYGVLKTQYDSLR 134

  Fly   462 EINEQARRDREE--QEKMKAQETMKSAQQNKQVQQQQ-----QQQQQQQQQQQQQHQQQQQQPQD 519
            ...:..|||.|.  ||..|.:..:......::.::..     :.....::::....::..:.|..
plant   135 HNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSS 199

  Fly   520 HHSIIAHNPGHLHHSVVGQNDL 541
            ....:.|:.|..:.|.....||
plant   200 PPQFLEHSDGLNYRSFTDLRDL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 18/56 (32%)
Abdominal-A 456..478 CDD:289192 6/23 (26%)
HB6NP_565536.1 Homeobox 62..115 CDD:278475 18/44 (41%)
HALZ 117..158 CDD:280364 9/40 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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