Protein Alignment abd-A and Hoxa5

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_077365.1
• Gene: Hoxa5 / 79241
• RGDID: 620609
• Length: 381
• Species: Rattus norvegicus
• Alignment Length: 417
• Identity: 128/417 - (30%)
• Similarity: 167/417 - (40%)
• Gaps: 129/417 - (30%)

  Fly   114 PVSS---SSPFQQHHPQVQQQHLNHQQQQHLH------HQQQQHHHQYSSLSAALQLQQQQH--- 166
            ||||   |||.::.......:..:.:....||      |:.....||     |.....||:|
  Rat     3 PVSSGWRSSPTERRRRVAGTRPGSARHPSRLHPTPPLLHEFTSRGHQ-----AGFTTGQQKHVIR 62

  Fly   167 ---------------HI-------SKLAAAAV-----ASH---GHAHQQLLL--------TPPSA 193
                           |:       .||...|:     |||   .|..:|:..        ..|:.
  Rat    63 SRTPYLGAYVGGNRVHVPVISIIHHKLCKGAIDAQTTASHKSSTHIKKQMSSYFVNSFCGRYPNG 127

  Fly   194 GNSQA---GDSSCSPSPSASGSSSLHRSL-------NDNSPGSASAS--ASASAASSVAAAAAAA 246
            .:.|.   ||.| |.|.....|:|:|...       .|.|.|.:.:.  .|...|.|.||.|:||
  Rat   128 PDYQLHNYGDHS-SVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSGERARSYAAGASAA 191

  Fly   247 AA------AASSSFA-----IPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSY 300
            .|      .|:|:.:     :|.|.:.|...: .|.|||.:.:...:|
  Rat   192 PAEPRYSQPATSTHSPPPDPLPCSAVAPSPGS-DSHHGGKNSLGNSSG----------------- 238

  Fly   301 QSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIAD 365
                  |||:|       .:|..:|.....:|.|...|:       |||....||..........
  Rat   239 ------ASANA-------GSTHISSREGVGTASAAEEDA-------PASSEQAGAQSEPSPAPPA 283

  Fly   366 LPR-YPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRI 429
            .|: ||||...        .:...:..||.|   :|.|..|||:||||||||||||.||||||||
  Rat   284 QPQIYPWMRKL--------HISHDNIGGPEG---KRARTAYTRYQTLELEKEFHFNRYLTRRRRI 337

  Fly   430 EIAHALCLTERQIKIWFQNRRMKLKKE 456
            ||||||||:||||||||||||||.||:
  Rat   338 EIAHALCLSERQIKIWFQNRRMKWKKD 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	46/51 (90%)
		Abdominal-A	456..478	CDD:289192	0/1 (0%)
Hoxa5	NP_077365.1	Homeobox	310..363	CDD:365835	46/52 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45659
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	4.010