DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and IRX6

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_077311.2 Gene:IRX6 / 79190 HGNCID:14675 Length:446 Species:Homo sapiens


Alignment Length:353 Identity:71/353 - (20%)
Similarity:126/353 - (35%) Gaps:112/353 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 PSAGNSQAGDSS--CSPSPSASGSSSLHRSLNDNSPGSASASA----------SASAASSVAAA- 242
            |..|:...|.|.  .|.|.|.:...|..||::|.:.||..|.|          ..||...:.|| 
Human     4 PHFGHPYRGASQFLASASSSTTCCESTQRSVSDVASGSTPAPALCCAPYDSRLLGSARPELGAAL 68

  Fly   243 ----AAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSM 303
                |..|||||:.|:    ....||....||.:|.|:..                         
Human    69 GIYGAPYAAAAAAQSY----PGYLPYSPEPPSLYGALNPQ------------------------- 104

  Fly   304 SVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPR 368
                         |:...||.|..|:.:                    .|||            .
Human   105 -------------YEFKEAAGSFTSSLA--------------------QPGA------------Y 124

  Fly   369 YPW-MTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELE---KEFHFNHYLTRRRRI 429
            ||: .||..:.   :||....:.:|..      .|:..||..|..|:   .|...|.|.|:..:|
Human   125 YPYERTLGQYQ---YERYGAVELSGAG------RRKNATRETTSTLKAWLNEHRKNPYPTKGEKI 180

  Fly   430 EIAHALCLTERQIKIWFQNRRMKLKKELRAV----KEINEQARRDREEQEKMKA----QETMKSA 486
            .:|....:|..|:..||.|.|.:||||.:..    .:..|:.:.:..|::.:..    .:.:.::
Human   181 MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKAEGGEEDSLGCLTADTKEVTAS 245

  Fly   487 QQNKQVQQQQQQQQQQQQQQQQQHQQQQ 514
            |:.:.::....:..:::::::::.:.::
Human   246 QEARGLRLSDLEDLEEEEEEEEEAEDEE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 17/54 (31%)
Abdominal-A 456..478 CDD:289192 3/25 (12%)
IRX6NP_077311.2 Homeobox_KN 164..203 CDD:283551 12/38 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..273 3/64 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..394
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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