Protein Alignment abd-A and hmx4

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001038836.2
• Gene: hmx4 / 751654
• ZFINID: ZDB-GENE-060825-142
• Length: 238
• Species: Danio rerio
• Alignment Length: 201
• Identity: 48/201 - (23%)
• Similarity: 74/201 - (36%)
• Gaps: 61/201 - (30%)

  Fly   285 EDKSCS----RYT-DTVMNSYQSMSVPASASAQFAQFYQHATAAA--------------SAVSAA 330
            ||.||.    ::| |.::||       .::|..|...:..|:...              .....:
Zfish     4 EDASCRPASLKFTIDNILNS-------KTSSRNFDSCHSRASLVVCRDGCLHHPGESEDPCKEGS 61

  Fly   331 SAGAIGVDSL---GNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNG 392
            .|...|:|.|   |:|.......|...:..|..                          |.|...
Zfish    62 DARLHGIDKLNREGDATVDALKAVDMRSESADS--------------------------CDDAQQ 100

  Fly   393 PNG------CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRM 451
            .|.      ..:::.|..:::.|..:||..|....||:...|..:|::|.|||.|:||||||||.
Zfish   101 KNNGKKNKLMTKKKTRTIFSKRQIFQLESTFDMKRYLSSAERACLANSLQLTETQVKIWFQNRRN 165

  Fly   452 KLKKEL 457
            |||::|
Zfish   166 KLKRQL 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	24/55 (44%)
		Abdominal-A	456..478	CDD:403567	1/2 (50%)
hmx4	NP_001038836.2	Homeodomain	115..169	CDD:459649	24/53 (45%)