Protein Alignment abd-A and Hoxd9

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001166940.1
• Gene: Hoxd9 / 688999
• RGDID: 1582908
• Length: 343
• Species: Rattus norvegicus
• Alignment Length: 371
• Identity: 99/371 - (26%)
• Similarity: 131/371 - (35%)
• Gaps: 149/371 - (40%)

  Fly   180 GHAHQQLLLT---PPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAA--SSV 239
            ||...::...   ||..|      :...|:..|.|            |.:|:..||.|.|  |||
  Rat    17 GHEGDEVFAARFGPPGPG------TQGRPAGVADG------------PAAAAEFASCSFAPKSSV 63

  Fly   240 AAAAAAAAAAASSSFAIPTSKMYPYVSNHP-----------------------------SSHGGL 275
            .:|:.:|.||...:.|..:...:||||..|                             |..||.
  Rat    64 FSASWSAVAAQPPAAATMSGLYHPYVSPPPLAAAEPGRYVRSWMEPLPGFPGGAGGGGGSGGGGG 128

  Fly   276 SGMAG--------------------FTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQ----- 315
            .|..|                    .||......:..|.:..:|..|......::|:.:|
  Rat   129 GGSGGPGPVPSPGGPANGRHYGIKPETGAAPAPSAASTSSSTSSSSSSKRTECSAARESQGSGGP 193

  Fly   316 ------FYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTL 374
                  |.:...|||:|.:|.:...:|:            |..||.||:.
  Rat   194 EFPCNSFLRDKAAAAAAAAAGNGPGVGI------------GTGPGTGGSS--------------- 231

  Fly   375 TDWMGSPFERVVCGDFNGPNGCP------------------------------RRRGRQTYTRFQ 409
                    |...|.|...| |||                              .|:.|..||::|
  Rat   232 --------EPSACSDHPSP-GCPLKEEEKQPPQPPQQQLDPNNPAANWIHARSTRKKRCPYTKYQ 287

  Fly   410 TLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
            ||||||||.||.||||.||.|:|..|.|||||:||||||||||:||
  Rat   288 TLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	38/51 (75%)
		Abdominal-A	456..478	CDD:289192	99/371 (27%)
Hoxd9	NP_001166940.1	Hox9_act	1..>155	CDD:282473	32/155 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	113..196		12/82 (15%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	220..267		13/82 (16%)
		HOX	276..328	CDD:197696	35/51 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000