Protein Alignment abd-A and Hoxa6

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001178016.1
• Gene: Hoxa6 / 685732
• RGDID: 1590236
• Length: 233
• Species: Rattus norvegicus
• Alignment Length: 234
• Identity: 92/234 - (39%)
• Similarity: 112/234 - (47%)
• Gaps: 46/234 - (19%)

  Fly   262 YPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQF----AQFYQHATA 322
            |..:...|:|:|..|       |.||:   ||...... ||.||.|...|.:    :.||.....
  Rat    32 YDALRPFPASYGASS-------LPDKT---YTSPCFYQ-QSNSVLACNRASYEYGASCFYSDKDL 85

  Fly   323 AASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIAD--------LPRYPWMTLTDWMG 379
            :.::.|..|......|.|.   ..|.....|.:....|..:.:        .|.||||
  Rat    86 SGASPSGNSKQRGPGDYLH---FSPEQQYKPDSSSVQGKALHEEGTDRKYTSPVYPWM------- 140

  Fly   380 SPFERV--VCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 442
               :|:  ..|...|.:|   |||||||||:||||||||||||.|||||||||||:|||||||||
  Rat   141 ---QRMNSCAGAVYGSHG---RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQI 199

  Fly   443 KIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQE 481
            ||||||||||.|||.:.:.......     |..:.||.|
  Rat   200 KIWFQNRRMKWKKENKLINSTQASG-----EDSEAKAGE 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	48/51 (94%)
		Abdominal-A	456..478	CDD:289192	2/21 (10%)
Hoxa6	NP_001178016.1	Homeobox	159..212	CDD:395001	48/52 (92%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45659
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910