DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment abd-A and Nkx6-3

DIOPT Version :9

Sequence 1:	NP_732176.1	Gene:	abd-A / 42037	FlyBaseID:	FBgn0000014	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	NP_001102925.1	Gene:	Nkx6-3 / 685102	RGDID:	1597780	Length:	262	Species:	Rattus norvegicus

Alignment Length:	209	Identity:	58/209 - (27%)
Similarity:	82/209 - (39%)	Gaps:	56/209 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   278 MAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGN 342
            :|.|:.::...| :|  :|.||:..:| |.....|.|....|..               .|.|..
  Rat    16 LAQFSEMKAPMC-QY--SVQNSFYKLS-PPGLGPQLAAGTPHGI---------------TDILSR 61

  Fly   343 ACTQPASGVM------PGAGGAGGAGIADLPR----------YP------WM-TLTDWMGS--PF 382
            ....|.|.::      .|.||....|:...|:          ||      |. |..||.||  |
  Rat    62 PVATPNSSLLSGYPHVAGFGGLSSQGVYYGPQVGSFSKTGNEYPTRTRNCWADTGQDWRGSTRP- 125

  Fly   383 ERVVCGDFNGPNGC-----PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 442
                |.  |.|:..     .::..|.|:|..|...|||.|....||....|..:|::|.:||.|:
  Rat   126 ----CS--NTPDPLSDTIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQV 184

  Fly   443 KIWFQNRRMKLKKE 456
            |:||||||.|.:|:
  Rat   185 KVWFQNRRTKWRKK 198

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	24/51 (47%)
abd-A	NP_732176.1	Abdominal-A	456..478	CDD:289192	0/1 (0%)
Nkx6-3	NP_001102925.1	Homeobox	143..197	CDD:395001	24/53 (45%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910