Protein Alignment abd-A and hoxa5a

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_073787191.1
• Gene: hoxa5a / 58055
• ZFINID: ZDB-GENE-000823-9
• Length: 265
• Species: Danio rerio
• Alignment Length: 268
• Identity: 88/268 - (32%)
• Similarity: 124/268 - (46%)
• Gaps: 63/268 - (23%)

  Fly   209 ASGSSSLHRSLNDNSPGS--ASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYP--YVSNHP 269
            |.|.:.:..|...:|||.  :|...:.|...|..|.........::|.|.|:|...|  .::|.|
Zfish    45 ACGYNGMDLSTGHSSPGHFLSSGERTQSYKDSPTATPVRYNQPVTASSAEPSSDHLPCSSLANSP 109

  Fly   270 SSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGA 334
            .|.                         .|::::.:..|::|..|              :.|.|.
Zfish   110 VSE-------------------------QSHRALKISLSSTAGSA--------------SKSFGT 135

  Fly   335 I----GVDSLGNACTQPASGVMPGAGGAGGAGIADLPR-YPWMTLTDWMGSPFERVVCGDFNGPN 394
            :    ||..:.::..:...   ||:|......:::.|: ||||...        .:...:..||.
Zfish   136 VLSREGVSKVSSSMEEEKP---PGSGQTASQNVSEAPQIYPWMRKL--------HISHDNLAGPE 189

  Fly   395 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA 459
            |   :|.|..|||:||||||||||||.||||||||||||.|||:||||||||||||||.||: ..
Zfish   190 G---KRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD-NK 250

  Fly   460 VKEINEQA 467
            :|.:|..|
Zfish   251 LKSMNMAA 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	46/55 (84%)
		Abdominal-A	456..478	CDD:403567	3/12 (25%)
hoxa5a	XP_073787191.1	None