DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and hoxb5b

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:346 Identity:101/346 - (29%)
Similarity:133/346 - (38%) Gaps:122/346 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 HQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSSC---SPSP-SAS 210
            :.|:.:..::......|.      .||..:..|.|.     ||. .::...|||   ||.| |.:
Zfish    47 YNYNGIDLSVNRPNNGHF------GAVGDNSRAFQN-----PSQ-ETRYRQSSCSLSSPDPLSCA 99

  Fly   211 GSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGL 275
            .|.:|  .|..:||.|..::                          ||               |.
Zfish   100 TSDTL--ELKGSSPPSDQST--------------------------PT---------------GN 121

  Fly   276 SGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSL 340
            |.:.....|...:.:.:.||   ...::|......||        |...|.....       :|:
Zfish   122 SRLTNSNNLTSSNSTHFADT---DETNVSSETEEGAQ--------TTTTSRTQKQ-------ESV 168

  Fly   341 GNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTY 405
            ..:.|.|..|..|..             :|||.         :..:..|..||:|   :|.|..|
Zfish   169 ATSTTTPNDGQTPQI-------------FPWMR---------KLHISHDMTGPDG---KRARTAY 208

  Fly   406 TRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRD 470
            ||:||||||||||||.||||||||||||||||:||||||||||||||.||:              
Zfish   209 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD-------------- 259

  Fly   471 REEQEKMKAQE--TMKSAQQN 489
                .|:|:..  |..||.||
Zfish   260 ----NKLKSMSLATAGSAFQN 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 46/51 (90%)
Abdominal-A 456..478 CDD:289192 1/21 (5%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 36/191 (19%)
Antp-type hexapeptide 183..188 2/17 (12%)
Homeobox 205..257 CDD:278475 46/51 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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