Protein Alignment abd-A and hoxc11b

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_009298848.1
• Gene: hoxc11b / 570925
• ZFINID: ZDB-GENE-000822-3
• Length: 306
• Species: Danio rerio
• Alignment Length: 410
• Identity: 102/410 - (24%)
• Similarity: 138/410 - (33%)
• Gaps: 139/410 - (33%)

  Fly    61 NSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSP--SHLSQHL--GQSPHSPVSSSSPF 121
            |..|..:.|....|:......|.:    |||.|......|  |.:|..|  .||.....|.|:.|
Zfish     6 NIGNFCSQSRKERTSEFGERASCA----SNLYLPSTYYVPEFSTVSSFLPQAQSRQITYSYSTNF 66

  Fly   122 QQHHPQVQQQ--HLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQ 184
            .| .|||:..  .||...:.|       |...|||.                         :|.:
Zfish    67 TQ-VPQVRDLPFELNPSGKWH-------HRGNYSSC-------------------------YAEE 98

  Fly   185 QLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAA 249
            .|:            ...|.| |||:.:..|.:  |:|
Zfish    99 DLV------------HRDCLP-PSATMTEMLMK--NEN--------------------------- 121

  Fly   250 ASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFA 314
                  :.....|....|||.:  |.....|.|.:..:|..|:.|
Zfish   122 ------VYNHHHYHPAINHPGT--GFYSSIGKTNVLPQSFDRFLD-------------------- 158

  Fly   315 QFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGA--GIADLPRYPWMTLTDW 377
                          .|.:||.| .|.||...:.:||....|......  ..||..:.........
Zfish   159 --------------CAQSGADG-GSEGNCLQKGSSGKPESASQVSSVLRSTADGEKELECEKNTT 208

  Fly   378 MGSPFERVVCGDFN------GPNGCPR-RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHAL 435
            .|| || ...|..|      |.:..|| |:.|..||:||..|||:||.||.|:.:.:|::::..|
Zfish   209 SGS-FE-TSSGTKNDNQTKSGHSTTPRMRKKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRIL 271

  Fly   436 CLTERQIKIWFQNRRMKLKK 455
            .||:||:||||||||||.||
Zfish   272 NLTDRQVKIWFQNRRMKEKK 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	29/51 (57%)
		Abdominal-A	456..478	CDD:289192	102/410 (25%)
hoxc11b	XP_009298848.1	DUF3528	41..180	CDD:288866	48/256 (19%)
		Homeobox	237..290	CDD:278475	29/52 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910