DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and AgaP_AGAP004646

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_001688962.1 Gene:AgaP_AGAP004646 / 5667644 VectorBaseID:AGAP004646 Length:577 Species:Anopheles gambiae


Alignment Length:636 Identity:146/636 - (22%)
Similarity:208/636 - (32%) Gaps:186/636 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PKYPQFQPFISSHHLTTTPPNSSSAAV--------AAALAAAAASASASVSASSSSNNNSSNTIA 67
            ||:|..:.:.:.|.......|.:.|..        :.:|..|.|.:....|.:..:..|...:.|
Mosquito    22 PKFPPSEDYANFHSGYGVGNNVTQAGTQDYLHHIQSESLHHAGAMSIGVPSGNGLTGGNGHVSGA 86

  Fly    68 GSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQH 132
            |||.......... .............||.:|.::       :.:|  ||......|||      
Mosquito    87 GSNAEGEERGGGG-GVGGGGGGGAEGGGGGVSAAY-------NDYS--SSMVGHYYHHP------ 135

  Fly   133 LNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPS----A 193
             :|....|.||....||..::...:.:|:|...   |.|.|.|:.:          .|||    |
Mosquito   136 -HHHHHHHHHHHPHAHHPSHNGYMSPVQMQSTS---SGLIAPAITT----------LPPSVSTAA 186

  Fly   194 GNSQAGDSSCSPSPSASG--------SSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAA 250
            .||...:.:..|:...||        |:..|.|:.| :|.....:...:.|..:...........
Mosquito   187 SNSSVSNQNSFPTNITSGYYNGYYSASTEGHTSIMD-TPLQCVGTEVTNTALGLQELGMKLDRRI 250

  Fly   251 SSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQ 315
            ..  |.||.:....:..........|....|...|.....:..|. ::|.........:.....:
Mosquito   251 EE--AAPTGQQLQELGMRLRCDDASSDQDEFLDEERLMLDQSPDE-LDSNDGDIDDLESDNDLGE 312

  Fly   316 FYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGS 380
            ...|||:....:.                                        ||||......| 
Mosquito   313 DVMHATSDGERII----------------------------------------YPWMKKIHVAG- 336

  Fly   381 PFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 445
                |..|.|. |...|:|: |..|||.|.||||||||:|.||||||||||||.|.|:|||||||
Mosquito   337 ----VANGSFQ-PGMEPKRQ-RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIW 395

  Fly   446 FQNRRMKLKKELRAVKEINEQARRDREEQEK----------------MKAQETMKSAQQNKQVQQ 494
            |||||||.||:.:.....|  .|:...:|.|                .|:::...:....|..||
Mosquito   396 FQNRRMKWKKDNKLPNTKN--VRKKNGDQSKSNASGSTGQSGVINNQKKSRKVSSTTLSTKSKQQ 458

  Fly   495 QQ------------------------------------------------------------QQQ 499
            ||                                                            .|.
Mosquito   459 QQTLQNECLRTDSLESMADVHGTITTINTSSSQYMSSSDVNNTLPMANGTNNSSNTIRNEHLSQH 523

  Fly   500 QQQQQQQQQQHQQQQQQPQDHHSIIAHN---PGHLH----HSVVGQNDLKL 543
            ||....|||.||.:|.|..:..|...:|   .|:::    |||:.:||..|
Mosquito   524 QQLPHNQQQHHQLRQSQLSNQSSNNNNNSNATGNMNNVQQHSVLIKNDYDL 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 42/51 (82%)
Abdominal-A 456..478 CDD:289192 4/37 (11%)
AgaP_AGAP004646XP_001688962.1 Homeobox 352..404 CDD:278475 42/51 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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