DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP002372

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_001688391.2 Gene:AgaP_AGAP002372 / 5667563 VectorBaseID:AGAP002372 Length:457 Species:Anopheles gambiae


Alignment Length:520 Identity:127/520 - (24%)
Similarity:188/520 - (36%) Gaps:164/520 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 HSPVSSSSP-----FQQHHPQVQQQHLNHQQ-----QQHLHHQQQ---QHHHQYSSLSAALQLQQ 163
            |.|.|||.|     .....|.:..:.|:.::     ..||....:   .:::..|:..::.:::.
Mosquito    14 HLPYSSSEPPPGPGSTACEPPIVNRPLSPRKFFERLYGHLERDDKSVINNNNNGSANGSSDEVRD 78

  Fly   164 QQHHISKLAAAAVAS--------HGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLN 220
            :..|::...|:...:        |.|.|.       |:.|||...|..|...|.|..|||...:.
Mosquito    79 RNVHVTVTKASDPCALIDETHRYHHHDHN-------SSSNSQKSVSVNSSISSGSPRSSLAVDIE 136

  Fly   221 DNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMA--GFTG 283
            ::|...||                           |.:..:.|...:||........:.  |.|.
Mosquito   137 EDSSQDAS---------------------------IGSPGLQPGGGDHPRQPPAYPPLRHYGITS 174

  Fly   284 LEDKSC-SRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDS-------- 339
            ....:| |.|           .||.:...|...|     .|.:...::|||.:.|.:        
Mosquito   175 SSSTACASEY-----------PVPTTIGGQCYGF-----LAVTPQQSSSAGVLPVPAPHLTQPGD 223

  Fly   340 ---LGNACTQPASGVM------PGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCG-DFNGP- 393
               :|....:|..|.|      ...|||||.|               .|.|..|...| ..:|| 
Mosquito   224 PALVGGLQHRPQHGSMAVSTFFSSTGGAGGGG---------------YGPPSFRPFFGIAHDGPQ 273

  Fly   394 ---------------NGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIK 443
                           .|.|||: |.|::..|||.||.|||.|.|::|.||.|:|..|.|:|.|||
Mosquito   274 LPAGLSAFLARRRKKEGRPRRQ-RTTFSSEQTLRLEVEFHRNEYISRGRRFELAEVLKLSETQIK 337

  Fly   444 IWFQNRRMKLKKELRAVKEINEQAR---------RDREEQEKMKAQETMKSAQQN-----KQVQQ 494
            |||||||.|.|:..:|  :|::|.|         .....|.......|....||:     :|.|:
Mosquito   338 IWFQNRRAKDKRIEKA--QIDQQYRTFAAVNGLLTPFSPQYPAALIATHHQHQQHPSHHPEQAQE 400

  Fly   495 QQQQQQQQQ---------QQQQQQHQQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVG 550
            .|||.|.||         :::.|:..||.::.:|.....:||.|.               |.|||
Mosquito   401 PQQQVQHQQLVPSLTPTIRRENQRPSQQTKRYEDRDRQGSHNSGE---------------GGGVG 450

  Fly   551  550
            Mosquito   451  450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 31/51 (61%)
Abdominal-A 456..478 CDD:289192 5/30 (17%)
AgaP_AGAP002372XP_001688391.2 Homeobox 296..348 CDD:278475 31/51 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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