DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and drgx

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001032182.1 Gene:drgx / 560399 ZFINID:ZDB-GENE-070330-1 Length:287 Species:Danio rerio


Alignment Length:117 Identity:37/117 - (31%)
Similarity:61/117 - (52%) Gaps:7/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 GDFNGPNGCPRRRGRQTYTRF--QTLE-LEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNR 449
            |||:  :|..||:.|:..|.|  |.|| ||..|...||.....|.|:|..:.|||.::::|||||
Zfish    31 GDFD--DGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQVWFQNR 93

  Fly   450 RMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQ 501
            |.|.:|..|...|  :...:::..:....|:...:|...:.:.:::..:.||
Zfish    94 RAKWRKTERGTSE--QDGGKEQMNEGNPPARNLNQSPVDHSRSKKEPMELQQ 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 24/54 (44%)
Abdominal-A 456..478 CDD:289192 2/21 (10%)
drgxNP_001032182.1 Homeobox 46..98 CDD:278475 23/51 (45%)
OAR 207..223 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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