DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and dmbx1b

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001017625.1 Gene:dmbx1b / 550288 ZFINID:ZDB-GENE-050417-97 Length:369 Species:Danio rerio


Alignment Length:253 Identity:58/253 - (22%)
Similarity:91/253 - (35%) Gaps:92/253 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 HGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIG 336
            |.|::|              |:...|||..:|   .:...|.||..|||.....:|.|.:.....
Zfish     3 HYGVNG--------------YSLHAMNSLSAM---YNLHQQAAQHAQHAPDYRPSVHALTLAERL 50

  Fly   337 VDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRG 401
            .|.:..|                        ||         ||...:             :||.
Zfish    51 ADIILEA------------------------RY---------GSQHRK-------------QRRS 69

  Fly   402 RQTYTRFQTLELEKEFHFNHY--LTRRRRIEIAHALC--LTERQIKIWFQNRRMKLKK------- 455
            |..:|..|...|||.|...||  :..|.|:    |:|  |.|.::::||:|||.|.:|       
Zfish    70 RTAFTAQQLEALEKTFQKTHYPDVVMRERL----AMCTNLPEARVQVWFKNRRAKFRKKQRSLQK 130

  Fly   456 -ELRAVKEINEQARRD--REEQEKMKAQ-----------ETMKSAQQNKQVQQQQQQQ 499
             :|:.:||...:..:|  :||...::||           .:..|.:.|::|.....:|
Zfish   131 EQLQRLKEAGTEGAQDEGKEEAPPVEAQAPPSPLDGRGLTSAPSCELNEEVNVTSPEQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 21/55 (38%)
Abdominal-A 456..478 CDD:289192 6/23 (26%)
dmbx1bNP_001017625.1 Homeobox 69..122 CDD:278475 21/56 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..253 12/65 (18%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 346..359
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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