DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and en1b

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001013516.1 Gene:en1b / 541371 ZFINID:ZDB-GENE-980526-6 Length:274 Species:Danio rerio


Alignment Length:328 Identity:80/328 - (24%)
Similarity:117/328 - (35%) Gaps:109/328 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 SAGNSQAGDSSCSPS-PSA-----SGSSSLHRSLN---DN----------SPGSASASASASAAS 237
            |..::::...|.||: ||.     ..:...||:.|   ||          .|||.. .|..|...
Zfish     9 SRDSTESESVSLSPNIPSPPILPHQAAQQAHRTTNFFIDNILRPDFGCKKDPGSRD-RAQTSGRE 72

  Fly   238 SVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQS 302
            :|                      .|.|. .||.:..|        .:|.:||  :|:..:|  |
Zfish    73 NV----------------------NPMVI-RPSHNSSL--------CQDSNCS--SDSTSSS--S 102

  Fly   303 MSVPASASAQFAQFYQH-ATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADL 366
            .|.|:|..:....|..: :|||.:..:..|...:.    .|..|.||....|             
Zfish   103 SSSPSSKQSSVKHFEGNGSTAARNGENTPSIMMVN----ANGGTPPAKESQP------------- 150

  Fly   367 PRYPWMTLTDWMGSPFERVVCGDFNG-PNGCPR-------------RRGRQTYTRFQTLELEKEF 417
                 :....|       |.|..::. |:..||             :|.|..:|..|...|:.||
Zfish   151 -----LLWPAW-------VYCTRYSDRPSSGPRTRKLKKKKSEKEDKRPRTAFTAEQLQRLKAEF 203

  Fly   418 HFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK----------ELRAVKEINEQARRDRE 472
            ..|.|:|.:||..:|..|.|.|.||||||||:|.|:||          :|.|....|......::
Zfish   204 QANRYITEQRRQSLAQELNLNESQIKIWFQNKRAKIKKASGYKNGLALQLMAQGLYNHSTTTVQD 268

  Fly   473 EQE 475
            |:|
Zfish   269 EKE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 26/55 (47%)
Abdominal-A 456..478 CDD:403567 5/20 (25%)
en1bNP_001013516.1 Homeodomain 186..241 CDD:459649 26/54 (48%)
Engrail_1_C_sig 242..272 CDD:431338 5/30 (17%)

Return to query results.
Submit another query.