DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and DUXA

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001012747.1 Gene:DUXA / 503835 HGNCID:32179 Length:204 Species:Homo sapiens


Alignment Length:96 Identity:31/96 - (32%)
Similarity:47/96 - (48%) Gaps:14/96 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKL----KKELRA 459
            ||.|.||:..|...|.|.|..|.|.....|.|:|..:.:.|.:::|||||||.:|    |:|..|
Human   102 RRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVA 166

  Fly   460 VKEINEQARRDREEQEKMKAQETMKSAQQNK 490
                      ..|::|:.|..|.::.|:..:
Human   167 ----------SLEQEEQGKIPEGLQGAEDTQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 21/55 (38%)
Abdominal-A 456..478 CDD:289192 4/21 (19%)
DUXANP_001012747.1 homeodomain 16..74 CDD:238039
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..101
Homeobox 105..155 CDD:278475 20/49 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..204 7/35 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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