Protein Alignment abd-A and Noto

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001178943.1
• Gene: Noto / 502857
• RGDID: 1562910
• Length: 245
• Species: Rattus norvegicus
• Alignment Length: 317
• Identity: 72/317 - (22%)
• Similarity: 105/317 - (33%)
• Gaps: 113/317 - (35%)

  Fly   201 SSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYV 265
            ||..|.|::||:..        .||..   .....|.|.......|.....|||::......|..
  Rat     2 SSPVPQPASSGTQV--------QPGDL---GPCPVAVSPVVPNHLARGRLESSFSVEAILARPET 55

  Fly   266 SNHPSSHGGLSGMAGFTGLEDKSCSRY--------TDTVMNSYQSMSVPASASAQFAQFYQHATA 322
            ..|.::...||..   |.|...|.|:|        |.|.:.:|.|:.:....|.
  Rat    56 REHSATSLPLSTC---TSLNFGSVSQYQVLPWVCSTGTWLPTYLSVGIYPMCSM----------- 106

  Fly   323 AASAVSAASAGAIGVDSLGNACTQPASGVMPG--------------AGGAGGAGIADLPRYPWMT 373
                                :|       |||              .|....:.:..|.|.|.:.
  Rat   107 --------------------SC-------MPGLNVTHLFCQQGLRLTGSELPSCLGPLKRAPTVN 144

  Fly   374 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 438
            |.|   ...||            .::|.|..::..|..||||.|...|.|..:.|.::|..|.||
  Rat   145 LQD---HNTER------------HQKRVRTMFSEQQLGELEKVFAKQHNLVGKERAQLAARLHLT 194

  Fly   439 ERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKA------QETMKSAQQN 489
            |.|::|||||||:|.:|                  |:|:|:      :|...|::.|
  Rat   195 ENQVRIWFQNRRVKYQK------------------QQKLKSPPPDAMEEPSNSSEGN 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	24/51 (47%)
		Abdominal-A	456..478	CDD:289192	2/21 (10%)
Noto	NP_001178943.1	Homeobox	158..209	CDD:278475	23/50 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910