DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and OTX1

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001186699.1 Gene:OTX1 / 5013 HGNCID:8521 Length:354 Species:Homo sapiens


Alignment Length:267 Identity:71/267 - (26%)
Similarity:98/267 - (36%) Gaps:98/267 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PFISSHHLTTTPPNSSSAAVAAALAA------AAASASASVSASSS-------SNNNSSNTI--- 66
            |.:||...:::..:||||..|||.||      .||::|.|..|:||       |..::..::   
Human   130 PAVSSSASSSSSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPGSAPASVSVP 194

  Fly    67 ----AGSNTSNTNNSSSS-----------------------PSSSSNNNSNLNLSGGSLSPSHLS 104
                |.||||....|.::                       |:.||:....::.| ..|:|.|..
Human   195 EPLAAPSNTSCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPTPSSSYFGGVDCS-SYLAPMHSH 258

  Fly   105 QHLGQ-SPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHH---QQQQHHHQYSSLSAALQLQQQQ 165
            .|..| ||.:| ||.:....|||             |.||   |...|||               
Human   259 HHPHQLSPMAP-SSMAGHHHHHP-------------HAHHPLSQSSGHHH--------------- 294

  Fly   166 HHISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSS-C--SPSPSASGSSSLHRSLNDNSPGSA 227
            ||           |.|.||..      .|:..|.:|: |  ...|.|:.:||..: ||.|||...
Human   295 HH-----------HHHHHQGY------GGSGLAFNSADCLDYKEPGAAAASSAWK-LNFNSPDCL 341

  Fly   228 SASASAS 234
            .....||
Human   342 DYKDQAS 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475
Abdominal-A 456..478 CDD:289192
OTX1NP_001186699.1 Homeobox 42..95 CDD:395001
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 4/15 (27%)
TF_Otx 180..274 CDD:397546 21/95 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..305 23/93 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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