Protein Alignment abd-A and Emx1

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_575584.5
• Gene: Emx1 / 500235
• RGDID: 1564002
• Length: 290
• Species: Rattus norvegicus
• Alignment Length: 373
• Identity: 83/373 - (22%)
• Similarity: 129/373 - (34%)
• Gaps: 122/373 - (32%)

  Fly   113 SPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVA 177
            :|.::::|..:..|:....|                    ||.:||...|            ...
  Rat     7 TPRTAAAPGHRAFPRAPLPH--------------------SSSAAATMFQ------------PAT 39

  Fly   178 SHGHAHQQLLLTPPSAGNSQ-AGDSSCSPSPSASGSSSLH-RSLNDNSPGSASASASASAASSVA 240
            ..|...:.|:......|.|. :|.:...|...|:....|. .:||...|       ||:..:.|:
  Rat    40 KRGFTIESLVAKDGGTGGSPGSGGAGSHPLAVAASEEPLRPTALNYPHP-------SAAETAFVS 97

  Fly   241 AAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSV 305
            ...|||||.||.|.......::|...|||:.                       ||..::|
  Rat    98 GFPAAAAAGASRSLYGGPELVFPEAMNHPAL-----------------------TVHPAHQ---- 135

  Fly   306 PASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIAD-LPRY 369
                                              ||::..||.....       .|...| |..|
  Rat   136 ----------------------------------LGSSSLQPPHSFF-------SAQHRDPLHFY 159

  Fly   370 PWMTLTDWMGSPFE-RVVCGD---FNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIE 430
            ||:....:.|..|: ..|..|   .:||.....:|.|..::..|.|.||:.|..|||:....|.:
  Rat   160 PWVLRNRFFGHRFQASEVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQ 224

  Fly   431 IAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMK 478
            :|.:|.|:|.|:|:||||||.|.|::     ::.|:.   .|.::|.|
  Rat   225 LAGSLSLSETQVKVWFQNRRTKYKRQ-----KLEEEG---PESEQKKK 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	23/51 (45%)
		Abdominal-A	456..478	CDD:289192	3/21 (14%)
Emx1	XP_575584.5	COG5576	141..>251	CDD:227863	39/121 (32%)
		Homeobox	196..248	CDD:278475	23/51 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910