Protein Alignment abd-A and Abd-B

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 546
• Identity: 139/546 - (25%)
• Similarity: 193/546 - (35%)
• Gaps: 198/546 - (36%)

  Fly   122 QQHHPQVQQQHLNHQQQQHLHHQQQQ----HHHQYSSLSAAL---------------QLQQQQHH 167
            ||||.|.|||....|:||||..|||.    |||.:..|...|               |.|||||.
  Fly     2 QQHHLQQQQQQQQQQEQQHLQEQQQHLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQQQQQQQHA 66

  Fly   168 ISKLAAAAV----------ASHG---HA----------------------------------HQQ 185
            :...:.::|          .:|.   ||                                  .||
  Fly    67 VVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQ 131

  Fly   186 LLLTPPSAGNSQAGDSSCSPSPSASGSSSL---------HRSL-NDNSPGSASASASASAASSVA 240
            .|.|.|.||       :.||:.:.:|.|:.         |:.| ...:|.|.::.||::......
  Fly   132 QLATTPVAG-------ALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQ 189

  Fly   241 AAAAAAAAAASSSFAIPTSKMYP-YVSNH---------------PSSHGGLSGMAGFTGLEDKSC 289
            ...||.|...:...|..|:.:.| .||:.               |:...|    .||......:.
  Fly   190 QQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAG----PGFETDTSAAV 250

  Fly   290 SR------YTDTVMNSY--------QSMSVPASASAQF--AQFY-------QHATAAASA----- 326
            .|      |.|...|.:        :.|........||  .|::       |..:|||:|
  Fly   251 KRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNE 315

  Fly   327 ----VSAASAGAIGVDSLGNACTQPASGVMPG------------AGGAGGAGIADL-PRYPWMTL 374
                ||||:..:  |:....:..:|.:...||            :|.:||..:..: |..|...|
  Fly   316 AERHVSAAARQS--VEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGL 378

  Fly   375 TDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTE 439
            .:|.|.               ...|:.|:.|::||||||||||.||.|:::::|.|:|..|.|||
  Fly   379 HEWTGQ---------------VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTE 428

  Fly   440 RQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQ 504
            ||:||||||||||.||                                 |.|.|..||.......
  Fly   429 RQVKIWFQNRRMKNKK---------------------------------NSQRQANQQNNNNNSS 460

  Fly   505 QQQQQHQQQQQQPQDHHSIIAHNPGH 530
            ......|..||....||..::.|.||
  Fly   461 SNHNHAQATQQHHSGHHLNLSLNMGH 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	34/51 (67%)
		Abdominal-A	456..478	CDD:289192	0/21 (0%)
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	34/52 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439741
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.930