Protein Alignment abd-A and slou

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Alignment Length: 596
• Identity: 140/596 - (23%)
• Similarity: 200/596 - (33%)
• Gaps: 215/596 - (36%)

  Fly    27 TTPP---------NSSSAAVAA--------ALAAAAASASASVSASS-------------SSNNN 61
            :|||         :::.||||.        :|......:|.|.|..|             ..|:|
  Fly    57 STPPAAKIPKFIISANGAAVAGKQEQELRYSLERLKQMSSESGSLLSRLSPLQEDSQDKEKPNHN 121

  Fly    62 SSNTIAGSN-TSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLG-----QSPHSPVSSSSP 120
            ::|::...| .|||..|.|.|:|..:.:.:.......|...:..:||.     |.||:.:....|
  Fly   122 NNNSLTNHNANSNTRRSQSPPASVGSVSFSSPAQQRKLLELNAVRHLARPEPLQHPHAALLQQHP 186

  Fly   121 FQQHHPQ---VQQQHLNHQQQQHLHHQQQQHHHQ----------YSSLSAALQLQQQQHHISKLA 172
            ....:||   ..|||::|.|.||..|....|.||          :...||...|:....  |..|
  Fly   187 HLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSS--SSTA 249

  Fly   173 AAAVASHG---------HAHQQLLLTPPSAGNSQAGDSSCSP------SPS-------------- 208
            ..:.|:..         |:.||  ::||.|.......||..|      :||
  Fly   250 PPSPATSPLSPPTSPAMHSDQQ--MSPPIAPPQNPPHSSQPPQQQQVAAPSDMDLERIKLVAAVA 312

  Fly   209 -----ASGSSSLHRSLNDNSPGSASASASASAASS--------------VAAAAAAAAAAASSSF 254
                 ||.:|:|..:.|..|..|.|.|.|:|.:.|              ..|||||||||.|...
  Fly   313 ARTTQASSTSALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAAAAAATSRQI 377

  Fly   255 AIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQH 319
            |..|     |..:..|....:.|    ...:....|..|.:|.....:.||.:||:|      ..
  Fly   378 AAAT-----YARSDTSEELNVDG----NDEDSNDGSHSTPSVCPVDLTRSVNSSAAA------NP 427

  Fly   320 ATAAASAVSAASAG----AIGVDSL---------------------------------------- 340
            ::|:.||.|...|.    |..|:::
  Fly   428 SSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSE 492

  Fly   341 ------------------GNACTQPAS-------GVMPGAGGAGGAGIADLPRYPWMTLTDWMGS 380
                              |:....|:|       |...|.|.:||
  Fly   493 DMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGG-------------------- 537

  Fly   381 PFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 445
                      .|..|...||.|..:|..|.:.||.:|....||:...|:.:|.:|.|||.|:|||
  Fly   538 ----------GGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIW 592

  Fly   446 FQNRRMKLKKE 456
            |||||.|.||:
  Fly   593 FQNRRTKWKKQ 603

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	26/55 (47%)
		Abdominal-A	456..478	CDD:403567	0/1 (0%)
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	26/55 (47%)