Protein Alignment abd-A and C15

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Alignment Length: 370
• Identity: 80/370 - (21%)
• Similarity: 127/370 - (34%)
• Gaps: 132/370 - (35%)

  Fly   143 HQQQQHHHQYSSLSAALQLQQQQHHI-----SKLAAAA---VASHGHAHQQLLLTP--PSAGNSQ 197
            |::..|.|:...   ..::::|:.|:     |:::..:   |...|.:......||  .|..:.|
  Fly     4 HEEDDHEHENEH---GEEVEEQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETPLSESLQSEQ 65

  Fly   198 AGDSSCSPSP-------SASGSSSLHRSLNDN-----SPGSASASASA----------------- 233
            ...||....|       |....:|.|...|:|     ||||:|.:.::
  Fly    66 TRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDL 130

  Fly   234 --SAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTV 296
              ..|:|:|.:...:|||           :|.|...:||:.||
  Fly   131 AYKLATSIANSTYGSAAA-----------LYSYPHLYPSAAGG---------------------- 162

  Fly   297 MNSYQSMSVPASASAQFAQF--YQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAG 359
                ..:.||...:......  ..||..|..||....|.|
  Fly   163 ----HVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAA------------------------- 198

  Fly   360 GAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCP--RRRGRQTYTRFQTLELEKEFHFNHY 422
                     :|   :...:|.|::          |..|  |::.|.::||.|..||||.||...|
  Fly   199 ---------FP---IARRIGHPYQ----------NRTPPKRKKPRTSFTRIQVAELEKRFHKQKY 241

  Fly   423 LTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQA 467
            |....|..:|..|.:|:.|:|.||||||.|.:::....:|...||
  Fly   242 LASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQA 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	25/51 (49%)
		Abdominal-A	456..478	CDD:289192	3/12 (25%)
C15	NP_476873.2	COG5576	<196..315	CDD:227863	36/138 (26%)
		Homeobox	220..273	CDD:278475	25/52 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910