Protein Alignment abd-A and Scr

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 622
• Identity: 166/622 - (26%)
• Similarity: 232/622 - (37%)
• Gaps: 201/622 - (32%)

  Fly     1 MSKFVF-DSMLPKYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSN 64
            ||.:.| :|:...|||          ...|..:...|..::...:...|..|.....|...|...
  Fly     8 MSSYQFVNSLASCYPQ----------QMNPQQNHPGAGNSSAGGSGGGAGGSGGVVPSGGTNGGQ 62

  Fly    65 TIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQH-LGQSPHSPVSSSSPFQQHHPQV 128
            ..||:.|...|:...:.::.:.|          |.|:....| ..|:.:.  ...:|....:.|:
  Fly    63 GSAGAATPGANDYFPAAAAYTPN----------LYPNTPQAHYANQAAYG--GQGNPDMVDYTQL 115

  Fly   129 QQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSA 193
            |.|.|..||||    ||||..|.:::.:.|.|.|||           :|...|..||
  Fly   116 QPQRLLLQQQQ----QQQQQQHAHAAAAVAAQQQQQ-----------LAQQQHPQQQ-------- 157

  Fly   194 GNSQAGDSSC-------SPSPS----ASGSSSLHRSLNDN----------------------SPG 225
            ...|..:.||       :|..|    .|||::.:.|.|.|                      ||.
  Fly   158 QQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPS 222

  Fly   226 SASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCS 290
            |...|.:.|....|...:.||||||:.            ::|   :|.| ||::|..|
  Fly   223 SVVESVARSLNKGVLGGSLAAAAAAAG------------LNN---NHSG-SGVSGGPG------- 264

  Fly   291 RYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGA 355
                       :::||           .|:...                 |::.::..||...|:
  Fly   265 -----------NVNVP-----------MHSPGG-----------------GDSDSESDSGNEAGS 290

  Fly   356 GGAGGAGIADLPR-YPWMTLTDWMGSPFERVVCG----DFNGPNGCPRRRGRQTYTRFQTLELEK 415
            ....|.|..:.|: ||||          :||..|    :.||..    :|.|.:|||:|||||||
  Fly   291 SQNSGNGKKNPPQIYPWM----------KRVHLGTSTVNANGET----KRQRTSYTRYQTLELEK 341

  Fly   416 EFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEIN-------------EQA 467
            |||||.|||||||||||||||||||||||||||||||.||| ..:..:|             .|.
  Fly   342 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE-HKMASMNIVPYHMGPYGHPYHQF 405

  Fly   468 RRDREEQEKMKAQETMKSAQQNKQVQQ--QQQQQQQQQQQQQQQHQQQQQQPQDHHSIIAHNPGH 530
            .....:...:.|.:....:....::.|  |:..|..........:|.|...|
  Fly   406 DIHPSQFAHLSAXDAWHFSGTGXRLNQLYQEPYQTAAAASAASGYQSQDGGP------------- 457

  Fly   531 LHHSVVGQNDLKLGLGMGVGVGVGGIGPGIGGGLGGN 567
                 :|      |..:|||.|.||.|....||..|:
  Fly   458 -----IG------GGSVGVGGGAGGPGSLANGGSNGS 483

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	47/51 (92%)
		Abdominal-A	456..478	CDD:289192	3/34 (9%)
Scr	NP_001368995.1	Homeobox	328..381	CDD:395001	47/52 (90%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439749
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D544833at33208
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	6	5.750