Protein Alignment abd-A and pb

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 432
• Identity: 105/432 - (24%)
• Similarity: 157/432 - (36%)
• Gaps: 110/432 - (25%)

  Fly   188 LTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASS 252
            |...|.|.....:|..:|....:|.:||          .......|.....|.....:.......
  Fly     8 LDTTSMGTQIKSESPLNPLQVQTGQTSL----------PVGGCGGAGVVGGVGGVGVSVGQPGIG 62

  Fly   253 SFAIP-------TSKMYPYVSNH--------PSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQS 302
            ...:|       .:||.|.....        .:|.||.                     :||..|
  Fly    63 QQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGF---------------------INSQPS 106

  Fly   303 MSVPASASAQFAQFYQHATAAA----SAVSAASAGAIGVD---SLGNACTQPASGVMPGAGGAGG 360
            |          |:|..|.:..:    :.|.:.:.|.:||:   ::|.....|. ||:|....
  Fly   107 M----------AEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPV-GVVPQTPD--- 157

  Fly   361 AGIADLPRYPWMTLTDWMGSPFERVVCGD-----FNGPNGCPRRRGRQTYTRFQTLELEKEFHFN 420
             |:..:|.||||...............||     |...||.|||. |..||..|.||||||||||
  Fly   158 -GMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRL-RTAYTNTQLLELEKEFHFN 220

  Fly   421 HYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 485
            .||.|.||||||.:|.|||||:|:||||||||.|::..:..:       |.:.::.:|..:....
  Fly   221 KYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTD-------DEDNKDSLKGDDDQSD 278

  Fly   486 AQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVG 550
            :..|                .::..|..:....|.....:::.||.:::....|:         .
  Fly   279 SNSN----------------SKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNN---------N 318

  Fly   551 VGVGGIGP--GIGGGLGGNLGMMSALDKSNHDLLKAVSKVNS 590
            ...|.:.|  .:..|:..||  |.:...|..:::.|.|.|.|
  Fly   319 PSAGNLTPNSSLETGISSNL--MGSTTVSASNVISADSSVAS 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	38/51 (75%)
		Abdominal-A	456..478	CDD:289192	1/21 (5%)
pb	NP_476669.3	COG5576	168..274	CDD:227863	50/113 (44%)
		Homeobox	202..254	CDD:278475	38/51 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439750
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.740