DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and mnx2b

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001315287.1 Gene:mnx2b / 406206 ZFINID:ZDB-GENE-040415-2 Length:328 Species:Danio rerio


Alignment Length:359 Identity:90/359 - (25%)
Similarity:151/359 - (42%) Gaps:77/359 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 HRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAG 280
            ||...:.|||.:|.|.:.|..|.......:......:....|.....|.:.|.|  |.||:.:.|
Zfish    18 HRGSREVSPGLSSDSPTGSPVSCRRGDTPSPRGTPGAIHLQPGIIPKPGLLNLP--HPGLTSIPG 80

  Fly   281 FTGLEDKSCSRYTDTVMNSYQSM--SVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNA 343
            .          || |.|....::  ..||.|...|.|..|.......|  ||.||::.::....|
Zfish    81 M----------YT-TPMYPISALGGQHPALAYTGFTQLTQPYPEQLKA--AAMAGSLPLEHWIRA 132

  Fly   344 CTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDW----MGSPFERVVCGDFNGPNGCPRRRGRQT 404
                  |:|             :||.|..| .:|    |.:|...::       ..|  ||.|..
Zfish   133 ------GIM-------------VPRLPDYT-CEWGSIQMTAPQSGLM-------GKC--RRPRTA 168

  Fly   405 YTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARR 469
            :|..|.||||.:|..|.||:|.:|.|:|.:|.|||.|:||||||||||.|:..:|    .|||.:
Zfish   169 FTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSRKA----KEQAAQ 229

  Fly   470 DREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDHHSI-----IAHNPG 529
            ...|:::...:.:.:.:::.......::|:::::::::....::.::...|..|     ::.:..
Zfish   230 VEVERQRGGTKPSGRDSRRAPAAPSVEEQEEEEEEEEEIDEDEEDEEDGQHKFINNSLSVSRSTD 294

  Fly   530 HLHHSVV------------------GQNDLKLGL 545
            .|||:..                  |:..::.||
Zfish   295 FLHHTAALYHPDSPFSEDDIEELHGGERKIRAGL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 30/51 (59%)
Abdominal-A 456..478 CDD:289192 5/21 (24%)
mnx2bNP_001315287.1 Homeobox 165..218 CDD:278475 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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