DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and mnx2a

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001009886.2 Gene:mnx2a / 406205 ZFINID:ZDB-GENE-040415-1 Length:309 Species:Danio rerio


Alignment Length:359 Identity:84/359 - (23%)
Similarity:133/359 - (37%) Gaps:86/359 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPS----SH 272
            |.|..:.:..:|||..|.............:...|....:.  .||...|...  :||.    |.
Zfish    14 SESSQQIVRGDSPGLCSEGVDVDMCKRTENSLPRAFQLQTG--VIPKPGMLNI--SHPGLTSLSQ 74

  Fly   273 GGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFY-QHATAAASAVSAASAGAIG 336
            |.:.||        .....|:.|.:.:..    |:.|.:.|.|.| .|..|||.|.|        
Zfish    75 GSMPGM--------YPSPMYSITALGAQH----PSFAYSGFTQPYPDHLKAAAMAGS-------- 119

  Fly   337 VDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWM-------TLTDWMGSPFERVVCGDFNGPN 394
                                         ||...|:       .|.|:.|:|...::       .
Zfish   120 -----------------------------LPLEHWLRAGLIMPRLADYSGAPQSGLI-------G 148

  Fly   395 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA 459
            .|  ||.|..:|..|.||||.:|..|.||:|.:|.|:|.:|.|||.|:||||||||||.|:. |.
Zfish   149 KC--RRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS-RK 210

  Fly   460 VKEINEQARRD--REEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDHHS 522
            .||...|...|  :..:...|.::..:.:..::......:::.::.:::.::..........|..
Zfish   211 AKEQAAQLETDGCKSGKRGNKPKDLSRCSAHDEDEDLDPEEEAEEDEEEFRRSINVGVSLPRHSD 275

  Fly   523 IIAHNP--GHLHHSVVGQNDL-------KLGLGM 547
            .:.|:.  .:..|.....:||       |:.||:
Zfish   276 FLQHSSALSYSSHGSYSDDDLEEIGADRKIRLGL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 30/51 (59%)
Abdominal-A 456..478 CDD:289192 5/23 (22%)
mnx2aNP_001009886.2 Homeobox 153..206 CDD:278475 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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