Protein Alignment abd-A and cdx1

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_989416.1
• Gene: cdx1 / 395055
• XenbaseID: XB-GENE-485396
• Length: 262
• Species: Xenopus tropicalis
• Alignment Length: 247
• Identity: 75/247 - (30%)
• Similarity: 102/247 - (41%)
• Gaps: 74/247 - (29%)

  Fly   263 PYVSNHPSSH--GGLS-----GMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHA 320
            |..|:.||.|  .|::     |..|.|      .|.||.:..:.:.....|.::||..||
 Frog    35 PQYSDFPSYHHVPGINSDPHHGQPGGT------WSSYTPSREDWHPYGPGPGASSANPAQ----- 88

  Fly   321 TAAASAVSAASAGAIGVDSLGNACTQPA--SGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFE 383
                  :|.:.:....|...|.....|:  |.|.|.:..|....:     |.||..|   |.|..
 Frog    89 ------ISFSPSDYNPVQPPGPGLLPPSLNSSVSPLSPSAQRRNL-----YEWMRRT---GVPTS 139

  Fly   384 RVVCGDFNGPNGCPRRRG--RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWF 446
                   ...||..|.:.  |..||..|.||||||||::.|:|.||:.|:|.:|.|||||:||||
 Frog   140 -------TNSNGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAASLALTERQVKIWF 197

  Fly   447 QNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQ 498
            ||||.|.:|       :|:                        |::|||.||
 Frog   198 QNRRAKERK-------VNK------------------------KKMQQQSQQ 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	33/51 (65%)
		Abdominal-A	456..478	CDD:289192	1/21 (5%)
cdx1	NP_989416.1	Caudal_act	13..133	CDD:282574	28/119 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	42..120		21/94 (22%)
		Interaction with DNA. /evidence=ECO:0000250|UniProtKB:P47902	152..173		12/20 (60%)
		Homeobox	153..205	CDD:278475	33/51 (65%)
		Interaction with 5-mCpG DNA. /evidence=ECO:0000250|UniProtKB:P47902	191..202		9/10 (90%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	203..262		9/47 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910