DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and ISL1

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_002193.2 Gene:ISL1 / 3670 HGNCID:6132 Length:349 Species:Homo sapiens


Alignment Length:107 Identity:26/107 - (24%)
Similarity:47/107 - (43%) Gaps:7/107 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 TRFQTLELEKEFHF--NHYLTRRR-----RIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEI 463
            ||.:|:..||:.|.  ..|....|     :.::.....|:.|.|::||||:|.|.||....:|::
Human   182 TRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMM
KQL 246

  Fly   464 NEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQ 505
            .:|...|:...:.|.....:.::.:......|....:.|..|
Human   247 QQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQ 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 17/54 (31%)
Abdominal-A 456..478 CDD:289192 3/21 (14%)
ISL1NP_002193.2 LIM1_Isl 17..71 CDD:188752
LIM domain 20..73
LIM2_Isl 79..133 CDD:188760
LIM domain 82..136
HOX 181..237 CDD:197696 17/54 (31%)
Homeodomain 184..243 17/58 (29%)
LIM-binding domain (LID). /evidence=ECO:0000250 262..291 3/27 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..349
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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