Protein Alignment abd-A and Nkx2-2

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_001178833.1
• Gene: Nkx2-2 / 366214
• RGDID: 1308443
• Length: 273
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 63/278 - (22%)
• Similarity: 98/278 - (35%)
• Gaps: 79/278 - (28%)

  Fly   269 PSSHGGLSGMAGFTGLEDKSC-SRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASA 332
            |:...|..|.:....::.... |.:.|:..|.|...    .||.:..|:..|..||::....:|:
  Rat    41 PAKRAGPLGQSALDAVQSLPLKSPFYDSSDNPYTRW----LASTEGLQYSLHGLAASAPPQDSSS 101

  Fly   333 GAIGVDSLGNACTQPASGVMPG-----AGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNG 392
            .:          .:|::...|.     .||.|.||
  Rat   102 KS----------PEPSADESPDNDKETQGGGGDAG------------------------------ 126

  Fly   393 PNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 457
                .:|:.|..:::.||.|||:.|....||:...|..:|..:.||..|:||||||.|.|:|: .
  Rat   127 ----KKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR-A 186

  Fly   458 RAVK--EINEQAR----------RDREEQEKMKAQE------------TMKSAQQNKQVQQQQQQ 498
            ||.|  |:.....          ||.:....:|||:            :..|||..:.:|...|.
  Rat   187 RAEKGMEVTPLPSPRRVAVPVLVRDGKPCHALKAQDLAAATFQAGIPFSAYSAQSLQHMQYNAQY 251

  Fly   499 QQQQQQQQQQQHQQQQQQ 516
            ......|....|...|.|
  Rat   252 SSASTPQYPTAHPLVQAQ 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	22/51 (43%)
		Abdominal-A	456..478	CDD:289192	6/33 (18%)
Nkx2-2	NP_001178833.1	Homeobox	131..185	CDD:395001	22/53 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910