Protein Alignment abd-A and Phox2b

DIOPT Version :9

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: XP_008768389.3
• Gene: Phox2b / 364152
• RGDID: 1560582
• Length: 314
• Species: Rattus norvegicus
• Alignment Length: 292
• Identity: 71/292 - (24%)
• Similarity: 98/292 - (33%)
• Gaps: 67/292 - (22%)

  Fly   287 KSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGV 351
            :||....||        |..|||.|.|:...|.:....:.:........|..||
  Rat    15 ESCMAGMDT--------SSLASAYADFSSCSQASGFQYNPIRTTFGATSGCPSL----------- 60

  Fly   352 MPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGC----PRRRGRQTYTRFQTLE 412
            .||:...|             ||.|...||:..|....|....|.    .:||.|.|:|..|..|
  Rat    61 TPGSCSLG-------------TLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKE 112

  Fly   413 LEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKM 477
            ||:.|...||.....|.|:|..:.|||.::::||||||.|.:|:.||.                .
  Rat   113 LERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAA----------------A 161

  Fly   478 KAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQ-QQQQQPQDHHSIIAHNPGHLHHSVVGQNDL 541
            .|....|:....|:....:..:.::.:....... .....|....|..|:..|
  Rat   162 AAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGG------------ 214

  Fly   542 KLGLGMGVGVGVGGIGPGIGGGLGGNLGMMSA 573
              |.|.......|..|||..||..|..|..:|
  Rat   215 --GGGPSPAGAPGAAGPGGPGGEPGKGGAAAA 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	23/51 (45%)
		Abdominal-A	456..478	CDD:289192	2/21 (10%)
Phox2b	XP_008768389.3	Homeobox	102..155	CDD:395001	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910