DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and unpg

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:594 Identity:121/594 - (20%)
Similarity:185/594 - (31%) Gaps:222/594 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TTTPPN-------SSSAAVAAALAAAAASASASVSAS-------------SSSNNNSSNTIAGSN 70
            |.|||:       ...|.....|:|.|..||:::..:             :.::...::.|||  
  Fly    44 TATPPSPPEERDQEQEAEQEQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAG-- 106

  Fly    71 TSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSS---------------- 119
                  ....|||.:.:.:       :..|...:|.....||.|..:..                
  Fly   107 ------GCYLPSSPAGHPA-------AQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFL 158

  Fly   120 PFQQHHPQVQQQHLNHQQQQHLHHQQQQH----HHQYSSLSAALQLQQQQHHISKLAAAAVASHG 180
            ||......|....|::::...|.:|...|    |.:...::||.::.:.|           |:.|
  Fly   159 PFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQ-----------ANPG 212

  Fly   181 HAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAA 245
            .|..| ..|||.|.:|.|...|.||...|     |...::::...|..:.:..|...|       
  Fly   213 MAQLQ-EPTPPQAHSSPAKSGSHSPMEPA-----LDVGMDEDFECSGDSCSDISLTMS------- 264

  Fly   246 AAAAASSSFAIPTSKMYPYVSNHPSSHGG---LSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPA 307
                                   |.::.|   .|....:|..:.:.||                 
  Fly   265 -----------------------PRNYNGEMDKSRNGAYTNSDSEDCS----------------- 289

  Fly   308 SASAQFAQFYQHATAAASAVSAASAGAI-GVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPW 371
                          ....|.|....|.: |.||.||.                            
  Fly   290 --------------DDEGAQSRHEGGGMGGKDSQGNG---------------------------- 312

  Fly   372 MTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALC 436
                               :..|...||| |..:|..|.||||:|||...||:...|.:||.:|.
  Fly   313 -------------------SSSNSKSRRR-RTAFTSEQLLELEREFHAKKYLSLTERSQIATSLK 357

  Fly   437 LTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQ----Q 497
            |:|.|:||||||||.|.|                     ::||..|.....:|......:    .
  Fly   358 LSEVQVKIWFQNRRAKWK---------------------RVKAGLTSHGLGRNGTTSGTKIVVPI 401

  Fly   498 QQQQQQQQQQQQHQQQQQ------QPQDHHSIIAHNPGHLHHSVVGQNDLK-----LGLGMGVGV 551
            .....:...:.||||.::      :|.....:.|...|.........|...     :|||:||||
  Fly   402 PVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNASSPSGGPVGLGVGVGV 466

  Fly   552 GVGGIGPGI 560
            || |:|.|:
  Fly   467 GV-GVGLGV 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 28/51 (55%)
Abdominal-A 456..478 CDD:289192 0/21 (0%)
unpgNP_477146.1 Homeobox 324..375 CDD:278475 27/50 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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