DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and BARHL2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_064447.1 Gene:BARHL2 / 343472 HGNCID:954 Length:387 Species:Homo sapiens


Alignment Length:416 Identity:87/416 - (20%)
Similarity:134/416 - (32%) Gaps:130/416 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SSNTIAGSNTSNTNNSSSSPSSSSNNNSNLN-------LSGGSLSPSHLSQHLGQSPHSPVS-SS 118
            :|.:..|.:|..::.||.||...:.:...|.       .|..:.||......:|.:|.||:| :.
Human     6 ASGSSFGIDTILSSASSGSPGMMNGDFRPLGEARTADFRSQATPSPCSEIDTVGTAPSSPISVTM 70

  Fly   119 SPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAH 183
            .|.:.|......||     ..||||.||......:...:...|.|||..:..             
Human    71 EPPEPHLVADATQH-----HHHLHHSQQPPPPAAAPTQSLQPLPQQQQPLPP------------- 117

  Fly   184 QQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAA 248
            ||    ||.....|.|.::.:|..|.| |..:...|.|:.|               .||.|..:.
Human   118 QQ----PPPPPPQQLGSAASAPRTSTS-SFLIKDILGDSKP---------------LAACAPYST 162

  Fly   249 AASSSFAIPTSKMYPYVSN--HPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASA 311
            :.||....|..:     ||  |.|....|......|.|:.:..|:                    
Human   163 SVSSPHHTPKQE-----SNAVHESFRPKLEQEDSKTKLDKREDSQ-------------------- 202

  Fly   312 QFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTD 376
              :....|.|.........|:..          :.|.....|                       
Human   203 --SDIKCHGTKEEGDREITSSRE----------SPPVRAKKP----------------------- 232

  Fly   377 WMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 441
                                  |:.|..::..|..:||:.|....||:.:.|:::|.||.||:.|
Human   233 ----------------------RKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQ 275

  Fly   442 IKIWFQNRRMKLKKELRAVKEINEQA 467
            :|.|:||||.|.|::.....|:..:|
Human   276 VKTWYQNRRTKWKRQTAVGLELLAEA 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 21/51 (41%)
Abdominal-A 456..478 CDD:289192 2/12 (17%)
BARHL2NP_064447.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..145 40/161 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..240 19/164 (12%)
Homeobox 236..288 CDD:278475 21/51 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 367..387
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.