DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abd-A and AgaP_AGAP012001

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_552227.3 Gene:AgaP_AGAP012001 / 3291475 VectorBaseID:AGAP012001 Length:505 Species:Anopheles gambiae


Alignment Length:587 Identity:118/587 - (20%)
Similarity:163/587 - (27%) Gaps:218/587 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PNSSSAAVAAALAAAAASASASVSASSSSNNNSSN------------TIAGSNTSNTNNSSSSPS 82
            |...|......|:....|::..:....|..|:..:            ||.|..|..|  |.|:.|
Mosquito    76 PGDGSRRSGTTLSQEDTSSNPDLHGGCSVVNSDDDSTLEPGRPEGRRTIGGGGTDRT--SPSAAS 138

  Fly    83 SSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQ 147
            |.........|.........|....|.....|.:..|....|||.       |....||||....
Mosquito   139 SDEGKPPTFGLRATQSLAEDLHARFGYPALHPGAHLSHLPAHHPA-------HHHAHHLHHGTHL 196

  Fly   148 HHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGS 212
            ||               .||                     |||.|.::..|..:. |..|.:..
Mosquito   197 HH---------------AHH---------------------TPPPASHALFGGRTW-PYESCNTL 224

  Fly   213 SSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSG 277
            ::.|:            .|:..|...:.|...:.|.:.|     |......|:.:  :..|||:.
Mosquito   225 NACHQ------------QAAQQAHQRLFAQQVSPADSTS-----PVHSERSYLGS--AGGGGLAT 270

  Fly   278 MAGFTGLEDKSCSRYTDTVMNSYQSMSVPA-SASAQFAQFYQHATAAASAVSAASAGAIGVDSLG 341
            :||..|.......|..       ..|..|: |.|.:....:.|...........:..:..|| :.
Mosquito   271 LAGPAGDHQLGGGRIG-------SGMRTPSPSDSERGDSHHHHLLHGGGGGDTHTENSDDVD-IE 327

  Fly   342 NACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGS-PFERVVCGDFNGPNGCPRRRGRQTY 405
            ..|......:.....|:       ||       |...|| |         ||..|..:|:.|..:
Mosquito   328 EGCDDEIDMIDDTDDGS-------LP-------TTERGSHP---------NGLGGHKKRKRRVLF 369

  Fly   406 TRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRD 470
            ::.||.|||:.|....||:...|..:|..:.||..|:||||||.|.|.|:               
Mosquito   370 SKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR--------------- 419

  Fly   471 REEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDHHSIIAHNPGHL--HH 533
                                                                 .||..|.|  ||
Mosquito   420 -----------------------------------------------------AAHEKGALDHHH 431

  Fly   534 SVVGQNDLKLGLGMGVGVGVGGI---------------GPGIGGGLGGNLGMMSALDKSNHDLLK 583
            .           |.|.|.|.||:               .|.:||            .|..||||.
Mosquito   432 G-----------GHGGGNGTGGLPSPRRVAVPVLVRDGKPCLGG------------SKQPHDLLT 473

  Fly   584 AV 585
            ||
Mosquito   474 AV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 22/51 (43%)
Abdominal-A 456..478 CDD:289192 0/21 (0%)
AgaP_AGAP012001XP_552227.3 Homeobox 365..418 CDD:278475 22/52 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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