DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and AgaP_AGAP003670

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_562540.3 Gene:AgaP_AGAP003670 / 3290880 VectorBaseID:AGAP003670 Length:458 Species:Anopheles gambiae


Alignment Length:428 Identity:93/428 - (21%)
Similarity:142/428 - (33%) Gaps:149/428 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 TNNSSSSPSSSSNNNS-------NLNLSGGSLSPSHL-------SQHLGQSPHSPVSSSSPFQQH 124
            |:..:||.|.::||..       |:..||..:...:|       |.|.....:|...:|     :
Mosquito    10 THTEASSGSEANNNTPFSVKDILNMVESGAGVVDGYLNCQMESPSNHFSYPAYSGYDTS-----Y 69

  Fly   125 HPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLT 189
            ||......::|......||    |||..:..||:.....     |.:.::.:.||        |.
Mosquito    70 HPPDPYGMISHGYLSQTHH----HHHDLNYGSASYDFGS-----SSMPSSIIPSH--------LP 117

  Fly   190 PPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASAS-AASSVAAAAAAAAAAASSS 253
            ||...:.|           :.||...|     ::|...:.:|::| |.||||             
Mosquito   118 PPHYSHGQ-----------SYGSYGTH-----STPVIGATNATSSPALSSVA------------- 153

  Fly   254 FAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKS--------CSRY-----------TDTVMNS 299
                            ||.|....:.|:..|:..|        ||.:           |.|.::|
Mosquito   154 ----------------SSIGSELELGGYGSLDKSSLMNGHEHPCSNFLLQDVRPTLLDTSTPLDS 202

  Fly   300 YQSMSVPAS---------ASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNAC-TQPASGVMPG 354
            ......||.         :|.......:|.....|.....:......|.|...| ||..:     
Mosquito   203 ASGTQSPADGIKIKDESFSSVSTCVTSEHVQELDSLCQLNNNNTAEEDMLQKECSTQLVT----- 262

  Fly   355 AGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPR--RRGRQTYTRFQTLELEKEF 417
                  :..::|.:                         ||..|  |:.|..:::.|.||||:.|
Mosquito   263 ------SSRSELRK-------------------------NGKLRAKRKPRILFSQGQVLELERRF 296

  Fly   418 HFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
            ....||:...|..:|..|.||..|:||||||||.|.|:
Mosquito   297 RQQRYLSAPERETLASILKLTPTQVKIWFQNRRYKSKR 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 24/51 (47%)
Abdominal-A 456..478 CDD:289192 93/428 (22%)
AgaP_AGAP003670XP_562540.3 HOX 277..333 CDD:197696 25/55 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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