Protein Alignment abd-A and B-H2

DIOPT Version :10

• Sequence 1: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Alignment Length: 544
• Identity: 117/544 - (21%)
• Similarity: 181/544 - (33%)
• Gaps: 228/544 - (41%)

  Fly    18 PFISSHHLTTTPPNSSSA--------AVAAALAAAAASASASVSASSSSNNNSSNTIAGSNTSNT 74
            |.:.|:..|.|...::.:        |.|||.:||||:|:|:::|:||....
  Fly    40 PAVGSNTTTATATTATRSRFMITDILAGAAAASAAAAAAAAALAAASSGGGR------------- 91

  Fly    75 NNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQ-- 137
                .||:.|....        ||...|...|..|..|           ||.|.|||...|||
  Fly    92 ----GSPTDSEREQ--------SLVAQHHHHHQQQQQH-----------HHHQQQQQQQQHQQAA 133

  Fly   138 -QQHLHHQQQ--------------QH--------------HH-------------QYSSLSAALQ 160
             ||::..|||              :|              ||             .|:.|....|
  Fly   134 LQQYIVQQQQLLRFEREREREREREHYRERHSPPGNNPYAHHPMPPHLLAHFPPAHYAVLQQQQQ 198

  Fly   161 LQQQQHH-------ISKLAAAAVASHGH----------------AHQQ----------------L 186
            .||||.|       :.:....|:..|||                :|||                .
  Fly   199 QQQQQQHPHPHHLQLERERLEALHRHGHGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSP 263

  Fly   187 LLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAAS 251
            |:.....||....:::.:.|.|||.:       |:|:..||||:::..:.:|           :|
  Fly   264 LMLQQLGGNGGNNNNNNNNSSSASNN-------NNNNNNSASANSNIISGNS-----------SS 310

  Fly   252 SSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQF 316
            |:            :|:.|.:|.:  :.|..|
  Fly   311 SN------------NNNGSGNGNM--LLGGPG--------------------------------- 328

  Fly   317 YQHATAAASAVSAASAGAIGVDSLGNAC---TQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWM 378
                    |::|...|..|. ||..:.|   .......|.....|.|...:.|.    ::|:.
  Fly   329 --------SSISGDQASTID-DSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLS----LSLSK-- 378

  Fly   379 GSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIK 443
                              .:|:.|..:|..|...|||.|....||:.:.|:|:|:.|.|::.|:|
  Fly   379 ------------------KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVK 425

  Fly   444 IWFQNRRMKLKKELRAVKEINEQA 467
            .|:||||.|.|::.....|:..:|
  Fly   426 TWYQNRRTKWKRQTAVGLELLAEA 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	23/55 (42%)
		Abdominal-A	456..478	CDD:403567	2/12 (17%)
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	23/55 (42%)