DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXD8

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_062458.1 Gene:HOXD8 / 3234 HGNCID:5139 Length:290 Species:Homo sapiens


Alignment Length:310 Identity:98/310 - (31%)
Similarity:130/310 - (41%) Gaps:93/310 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 ASASASASAASSV-----------------AAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGG 274
            |:|:|:|:|..::                 ||||||.....:|:...|.:....:...|||....
Human    15 AAAAAAAAAGEAINPTYYDCHFAPEVGGRHAAAAAALQLYGNSAAGFPHAPPQAHAHPHPSPPPS 79

  Fly   275 LSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVP---------------ASASAQFAQFY------- 317
            .:|..|..|...:.......:...:||:...|               .:...:.|:||       
Human    80 GTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPPCGGIACHGEPAKFYGYDNLQR 144

  Fly   318 -------QHATAAASAVSAASAGAIGVD-SLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTL 374
                   |.|.........:|:|.||.| ...|..:.|:.                  .:|||. 
Human   145 QPIFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQ------------------MFPWMR- 190

  Fly   375 TDWMGSPFERVVCGDFNGPNGCP-RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 438
                              |...| ||||||||:|||||||||||.||.||||:||||::|||.||
Human   191 ------------------PQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALT 237

  Fly   439 ERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQ 488
            |||:||||||||||.|||       |.:.:.....|| :|..||.|.||:
Human   238 ERQVKIWFQNRRMKWKKE-------NNKDKFPVSRQE-VKDGETKKEAQE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 43/51 (84%)
Abdominal-A 456..478 CDD:289192 4/21 (19%)
HOXD8NP_062458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..127 10/66 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..200 14/75 (19%)
Homeobox 201..253 CDD:278475 43/51 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..290 10/33 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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