DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXD3

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:253 Identity:77/253 - (30%)
Similarity:107/253 - (42%) Gaps:65/253 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 GLSGMAGFTGLEDKSCSRYTDTVMNS--YQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIG 336
            ||.|..|:        |:.|||...|  :|....||:||:....:...|.:..|:....:....|
Human    27 GLFGGYGY--------SKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKG 83

  Fly   337 VDSLGNACTQPASGVMPGAGGA------------------------------GGAGIADLPR--- 368
            .: |..:|.:|.:|...|.||.                              ||...|..|:   
Human    84 AE-LNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGP 147

  Fly   369 -------------YPWMTLTDWMGSPFERVVCG------DFNGPNGCPRRRGRQTYTRFQTLELE 414
                         :|||  .:...:..::..|.      :...|.|...:|.|..||..|.:|||
Human   148 NASSSSATISKQIFPWM--KESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELE 210

  Fly   415 KEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDRE 472
            ||||||.||.|.||:|:|:.|.||||||||||||||||.||:.:|...::..|.:..|
Human   211 KEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPE 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 38/55 (69%)
Abdominal-A 456..478 CDD:403567 3/17 (18%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 19/131 (15%)
Antp-type hexapeptide 160..165 3/6 (50%)
Homeodomain 195..251 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 3/16 (19%)
DUF4074 369..430 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

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