DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXB6

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens


Alignment Length:320 Identity:106/320 - (33%)
Similarity:138/320 - (43%) Gaps:71/320 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 TPPSAG----NSQAGDSSCSPSPSASGS-----SSLHRS----------LNDNSPGSASASASAS 234
            ||||.|    |:|....|....|.::|.     ::..||          .....|.:.....|:.
Human     4 TPPSPGSLPENAQVSRHSRRREPRSTGRQFCGFNAARRSDYKTQQIINPAEQQRPRAPPLPMSSY 68

  Fly   235 AASSVAAAAAAAAAAA--------SSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDK--SC 289
            ..:|......|:...:        ||.:|.|       :.::|:.:|...|       :||  :.
Human    69 FVNSTFPVTLASGQESFLGQLPLYSSGYADP-------LRHYPAPYGPGPG-------QDKGFAT 119

  Fly   290 SRYTDTVMNSYQSMSV----PASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASG 350
            |.|.......|...:.    ||.|      ||:...:|.:...|........:...:.|.|..| 
Human   120 SSYYPPAGGGYGRAAPCDYGPAPA------FYREKESACALSGADEQPPFHPEPRKSDCAQDKS- 177

  Fly   351 VMPGAGGAGGAGIADLPRYPWM-TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELE 414
                ..|.........|.|||| .:.....|.|         ||:|   |||||||||:||||||
Human   178 ----VFGETEEQKCSTPVYPWMQRMNSCNSSSF---------GPSG---RRGRQTYTRYQTLELE 226

  Fly   415 KEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQ 474
            ||||:|.|||||||||||||||||||||||||||||||.|||.:.:......|..:.|:|
Human   227 KEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKQ 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 48/51 (94%)
Abdominal-A 456..478 CDD:289192 4/19 (21%)
HOXB6XP_011523029.1 Homeobox 214..266 CDD:278475 48/51 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
54.870

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