DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXB4

DIOPT Version :10

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_076920.1 Gene:HOXB4 / 3214 HGNCID:5115 Length:251 Species:Homo sapiens


Alignment Length:269 Identity:86/269 - (31%)
Similarity:105/269 - (39%) Gaps:64/269 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 NSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAI--- 256
            ||...|....|....|.|..|.   :|:|||..:......::....|.....||.....:|.   
Human     9 NSNYVDPKFPPCEEYSQSDYLP---SDHSPGYYAGGQRRESSFQPEAGFGRRAACTVQRYAACRD 70

  Fly   257 PTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHAT 321
            |.....|.....|....|||..|                        ..|..|.|...:..|...
Human    71 PGPPPPPPPPPPPPPPPGLSPRA------------------------PAPPPAGALLPEPGQRCE 111

  Fly   322 AAASA--VSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFER 384
            |.:|:  ....:...:......:||.:|..                   ||||          .:
Human   112 AVSSSPPPPPCAQNPLHPSPSHSACKEPVV-------------------YPWM----------RK 147

  Fly   385 VVCGDFNGPN--GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQ 447
            |.....| ||  |...:|.|..|||.|.||||||||:|.|||||||:||||||||:|||||||||
Human   148 VHVSTVN-PNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQ 211

  Fly   448 NRRMKLKKE 456
            |||||.||:
Human   212 NRRMKWKKD 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 44/55 (80%)
Abdominal-A 456..478 CDD:403567 0/1 (0%)
HOXB4NP_076920.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 28/151 (19%)
Antp-type hexapeptide 141..146 4/33 (12%)
Homeodomain 163..219 CDD:459649 44/55 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..251 0/1 (0%)

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