DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXA10

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens


Alignment Length:315 Identity:91/315 - (28%)
Similarity:124/315 - (39%) Gaps:85/315 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 PPSAGNSQAGDSSCSPSPSASGSS-SLHRSLNDNSPGSASASASASAASSVAAAAA--------- 244
            ||.....|.......|.|:...:| |..:::.:.|  |.....||.....|:|.||         
Human   133 PPPPPQQQPPPPPQPPQPAPQATSCSFAQNIKEES--SYCLYDSADKCPKVSATAAELAPFPRGP 195

  Fly   245 ---AAAAAASSSFAIP----TSKMYPYVSNHPSSHGGLSGMA-----------GFTGLEDKSCSR 291
               ..|...||...:|    .|:.|.....:.|..||...:.           || .|.....|.
Human   196 PPDGCALGTSSGVPVPGYFRLSQAYGTAKGYGSGGGGAQQLGAGPFPAQPPGRGF-DLPPALASG 259

  Fly   292 YTDTVMNSYQSMSVP----ASASAQFAQFYQHATAAASAV-------SAASAGAIGVDSLGNACT 345
            ..|.........|.|    |..|...:|..:.|.|::||.       |.:|..:...|||||:..
Human   260 SADAARKERALDSPPPPTLACGSGGGSQGDEEAHASSSAAEELSPAPSESSKASPEKDSLGNSKG 324

  Fly   346 QPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQT 410
            :.|:.                    |:|                  ..:|   |:.|..||:.||
Human   325 ENAAN--------------------WLT------------------AKSG---RKKRCPYTKHQT 348

  Fly   411 LELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR--AVKEI 463
            |||||||.||.||||.||:||:.::.||:||:|||||||||||||..|  .::|:
Human   349 LELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIREL 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 36/51 (71%)
Abdominal-A 456..478 CDD:289192 2/10 (20%)
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 29/159 (18%)
Homeobox 339..392 CDD:278475 36/52 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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