DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXA4

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_002132.3 Gene:HOXA4 / 3201 HGNCID:5105 Length:320 Species:Homo sapiens


Alignment Length:367 Identity:98/367 - (26%)
Similarity:120/367 - (32%) Gaps:131/367 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 SQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQ--HLHHQQQQHHHQYSSLSAALQLQQQQH 166
            :||.|...........|..|..|....|||..||.|  |....::.....|:..:|        .
Human    24 AQHSGSGGADGGPGGGPGYQQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTA--------R 80

  Fly   167 HISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASA 231
            ..:..|||...:||.|                  .:..|.....|:|.......:..|..|...|
Human    81 EPAYPAAALYPAHGAA------------------DTAYPYGYRGGASPGRPPQPEQPPAQAKGPA 127

  Fly   232 SASAASSV-----------AAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLE 285
            ....||.|           .|...||.....::.|.|                            
Human   128 HGLHASHVLQPQLPPPLQPRAVPPAAPRRCEAAPATP---------------------------- 164

  Fly   286 DKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASG 350
                              .|||..|           |.|..:..|....:|:           .|
Human   165 ------------------GVPAGGS-----------APACPLLLADKSPLGL-----------KG 189

  Fly   351 VMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFN-GPNGCPRRRGRQTYTRFQTLELE 414
            ..|..             ||||          :::.....| ..||...:|.|..|||.|.||||
Human   190 KEPVV-------------YPWM----------KKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELE 231

  Fly   415 KEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            ||||||.||||||||||||.|||:|||:||||||||||.||:
Human   232 KEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 43/51 (84%)
Abdominal-A 456..478 CDD:289192 0/1 (0%)
HOXA4NP_002132.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..77 14/52 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..168 15/112 (13%)
Antp-type hexapeptide 194..199 4/27 (15%)
Homeobox 218..271 CDD:278475 43/52 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..320 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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