DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXA3

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001371264.1 Gene:HOXA3 / 3200 HGNCID:5104 Length:443 Species:Homo sapiens


Alignment Length:282 Identity:79/282 - (28%)
Similarity:102/282 - (36%) Gaps:64/282 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 PPSAGNSQAGDSSCSPSPSAS---GSSSLHR-SLNDNSPGSASASASASAASSVAAAAAAAAAAA 250
            |..|.|..|.:::..|.|:::   .....|| :.:..||.||.....|...|.......:|..:.
Human    17 PYQAANGFAYNANQQPYPASAALGADGEYHRPACSLQSPSSAGGHPKAHELSEACLRTLSAPPSQ 81

  Fly   251 SSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQ 315
            ..|...|..        ||.                                   |..|:....|
Human    82 PPSLGEPPL--------HPP-----------------------------------PPQAAPPAPQ 103

  Fly   316 FYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPR-----YPWM--- 372
            ..|.|....:...||...........||...|.      ...|..:.:.:.|.     :|||   
Human   104 PPQPAPQPPAPTPAAPPPPSSASPPQNASNNPT------PANAAKSPLLNSPTVAKQIFPWMKES 162

  Fly   373 ---TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHA 434
               |......|.......||.:.|.....:|.|..||..|.:|||||||||.||.|.||:|:|:.
Human   163 RQNTKQKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANL 227

  Fly   435 LCLTERQIKIWFQNRRMKLKKE 456
            |.||||||||||||||||.||:
Human   228 LNLTERQIKIWFQNRRMKYKKD 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 37/51 (73%)
Abdominal-A 456..478 CDD:289192 0/1 (0%)
HOXA3NP_001371264.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..147 16/120 (13%)
Antp-type hexapeptide 155..160 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..196 7/36 (19%)
Homeobox 195..248 CDD:395001 37/52 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..338 2/3 (67%)
DUF4074 378..441 CDD:404218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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