DRSC/TRiP Functional Genomics Resources

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Protein Alignment abd-A and HOXA2

DIOPT Version :9

Sequence 1:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens


Alignment Length:318 Identity:93/318 - (29%)
Similarity:126/318 - (39%) Gaps:86/318 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 VMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGG--- 357
            |.:::||.|:..|.       ..|:|.........      :.||     .|.|....||||   
Human    28 VADTFQSSSIKTST-------LSHSTLIPPPFEQT------IPSL-----NPGSHPRHGAGGRPK 74

  Fly   358 ---AGG------AGIADLPRYPWM-----------------TLTDWMGSPF-----ERVVCGDFN 391
               ||.      ||....|.||||                 ..|.....|.     |.:...|.:
Human    75 PSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALLPAAAAAATAAATGPACLSHKESLEIADGS 139

  Fly   392 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456
            |...   ||.|..||..|.||||||||||.||.|.||:|||..|.|||||:|:||||||||.|::
Human   140 GGGS---RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 201

  Fly   457 LRAVKEINEQAR-RDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDH 520
            .:..:..|.:.: :..|:.||::..|..|:..: :.:.......:::....||....|||.|..|
Human   202 TQCKENQNSEGKCKSLEDSEKVEEDEEEKTLFE-QALSVSGALLEREGYTFQQNALSQQQAPNGH 265

  Fly   521 H--------SIIAHNPGHLHH------------SVVGQNDLKLGLGMGVGVGVGGIGP 558
            :        |.:..|..:|.|            |.:|||         .|.|:....|
Human   266 NGDSQSFPVSPLTSNEKNLKHFQHQSPTVPNCLSTMGQN---------CGAGLNNDSP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 37/51 (73%)
Abdominal-A 456..478 CDD:289192 4/22 (18%)
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 14/61 (23%)
Antp-type hexapeptide 94..99 3/4 (75%)
Homeobox 147..200 CDD:395001 37/52 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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